2 component_ids and lengths loaded from FASTA. No runs of Ns longer than 10 bp found in FASTA sequences. 3:singleton_1 1 630 1 W LACBIscaffold_1_Cont1 1 630 - WARNING: the span overlaps a previous span for this component: 1..630 at line 2 WARNING: same component_id found on different scaffolds; previous occurance at line 2, in another object WARNING: in unplaced singleton scaffold, component orientation is not "+" 4:singleton_1na 1 630 1 W LACBIscaffold_1_Cont1 1 630 na WARNING: the span overlaps a previous span for this component: 1..630 at line 2 WARNING: same component_id found on different scaffolds; previous occurance at line 3, in another object WARNING: in unplaced singleton scaffold, component orientation is not "+" 5:singleton_2 1 600 1 W LACBIscaffold_1_Cont1 1 600 + WARNING: the span overlaps a previous span for this component: 1..630 at line 2 WARNING: same component_id found on different scaffolds; previous occurance at line 4, in another object WARNING: in unplaced singleton scaffold, component is not used in full (600 out of 630 bp) 6:singleton_3 1 600 1 W LACBIscaffold_1_Cont1 31 630 + WARNING: the span overlaps a previous span for this component: 1..630 at line 2 WARNING: same component_id found on different scaffolds; previous occurance at line 5, in another object WARNING: in unplaced singleton scaffold, component is not used in full (600 out of 630 bp) No errors, 14 warnings. Count Code Description 4 w35 the span overlaps a previous span for this component 4 w49 same component_id found on different scaffolds 2 w50 in unplaced singleton scaffold, component is not used in full 2 w51 in unplaced singleton scaffold, component orientation is not "+" - - component name(s) in FASTA not found in AGP - - no gap lines Objects : 5 - with single component: 5 Scaffolds : 5 - with single component: 5 Components : 5 (W) orientation + : 3 orientation - : 1 orientation ? (formerly 0) : 0 orientation na : 1 Gaps : 0 Object names : 5 singleton_[0..3]: 4 singleton_1na : 1 Component names : 1 != 2 in the FASTA LACBIscaffold_1_Cont1: 1 WARNING -- 1 component name in FASTA not found in AGP: LACBIscaffold_extra #Comment line count : 1