v1 - Revision 103783: /trunk/c++/src/algo/structure/cd_utils

• ..
• CMakeLists.txt
• CMakeLists.xcd_utils.lib.txt
• Makefile.in
• Makefile.xcd_utils.lib
• cuAlign.cpp
• cuAlignedDM.cpp
• cuAlignmentCollection.cpp
• cuBaseClusterer.cpp
• cuBlast2Seq.cpp
• cuBlock.cpp
• cuBlockExtender.cpp
• cuBlockFormater.cpp
• cuBlockIntersector.cpp
• cuBookRefUtils.cpp
• cuCD.cpp
• cuCdCore.cpp
• cuCdFamily.cpp
• cuCdFromFasta.cpp
• cuCdUpdateParameters.cpp
• cuCdUpdater.cpp
• cuConsensusMaker.cpp
• cuDbPriority.cpp
• cuDistmat.cpp
• cuDmAlignedOptimalScore.cpp
• cuDmAlignedscore.cpp
• cuDmBlastscore.cpp
• cuDmIdentities.cpp
• cuFlexiDm.cpp
• cuHitsDistributor.cpp
• cuMatrix.cpp
• cuNRCriteria.cpp
• cuPrefTaxNodes.cpp
• cuPssmMaker.cpp
• cuPssmScorer.cpp
• cuReadFastaWrapper.cpp
• cuResidueProfile.cpp
• cuRowSourceTable.cpp
• cuScoringMatrix.cpp
• cuSeqAnnotFromFasta.cpp
• cuSeqSwapper.cpp
• cuSeqTreeAPI.cpp
• cuSeqTreeAlg.cpp
• cuSeqTreeAsnizer.cpp
• cuSeqTreeFactory.cpp
• cuSeqTreeNj.cpp
• cuSeqTreeRootedLayout.cpp
• cuSeqTreeSlc.cpp
• cuSeqTreeStream.cpp
• cuSeqtree.cpp
• cuSequence.cpp
• cuSequenceTable.cpp
• cuSimpleB2SWrapper.cpp
• cuSort.cpp
• cuStdAnnotTypes.cpp
• cuTaxClient.cpp
• cuTaxNRCriteria.cpp
• cuTaxTree.cpp
• cuUtils.cpp