# $Id$

SRC_C = aa_ungapped blast_diagnostics blast_engine blast_extend \
        blast_filter blast_gapalign blast_hits blast_hspstream blast_itree \
        blast_kappa blast_lookup blast_aalookup blast_aascan blast_nalookup \
        blast_nascan blast_message blast_options blast_psi na_ungapped \
        blast_psi_priv blast_seg blast_seqsrc blast_setup blast_stat \
        blast_traceback blast_util gapinfo greedy_align \
        hspfilter_collector hspfilter_besthit hspfilter_culling \
        link_hsps lookup_util lookup_wrap matrix_freq_ratios \
        ncbi_std ncbi_math blast_encoding pattern phi_extend phi_gapalign \
        phi_lookup blast_parameters blast_posit blast_program blast_query_info \
        blast_tune blast_sw blast_dynarray split_query gencode_singleton \
        index_ungapped blast_traceback_mt_priv blast_hspstream_mt_utils boost_erf \
        jumper hspfilter_mapper spliced_hits

SRC   = $(SRC_C)

LIB = blast

#CFLAGS  = $(FAST_CFLAGS)  -pedantic -std=c99 -Wall -W -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wundef -Winline -Wno-parentheses
CFLAGS  = $(FAST_CFLAGS)
LDFLAGS = $(FAST_LDFLAGS)
WATCHERS = camacho fongah2


USES_LIBRARIES =  \
    composition_adjustment connect tables