connect$
corelib$
ctools$
util$
util/bitset$
util/regexp$
util/sequtil$
util/tables$
serial$
serial/datatool$
objects$
objects/misc$
objects/biblio$
objects/blast$
objects/blastdb$
objects/cdd$
objects/cn3d$
objects/general$
objects/id1$
objects/medline$
objects/mmdb$
objects/ncbimime$
objects/pub$
objects/scoremat$
objects/seq$
objects/seqcode$
objects/seqset$
objects/taxon1$
objtools/readers$
objtools/blast/seqdb_reader$
algo/blast/composition_adjustment$
algo/blast/dbindex$
algo/blast/api$
algo/structure/cd_utils$
algo/structure/struct_dp$
algo/structure/struct_util$
algo/structure/threader$
app/cn3d